PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv3_048700_sktd.t2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 273aa    MW: 31009.1 Da    PI: 4.753
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv3_048700_sktd.t2genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH192.6e-06159183630
                         HHHHHHHHHHHHHHHHHHHCTSCCC CS
                 HLH   6 nerErrRRdriNsafeeLrellPka 30 
                            E+rRR+ri ++++ L  l+P++
  Bv3_048700_sktd.t2 159 RDSEQRRRKRISDKLQVLDNLVPHS 183
                         678********************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000830.0013154185No hitNo description
SuperFamilySSF474597.56E-5157198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.2E-5159186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MSCFKCGTSS GNVNASSFSG FNITSNMQAA LTDQVDVAIN DTTSAEDFDA LHDWMDNQLA  60
DLAKHDHNDV DGYLSLQDNN KDTVSQDVTG LDFQISSLHD SDDDHHDDHT MDHNFIREVE  120
LRNVDFDTSK GRQLFEPEQT SPLDEDQQGA TCWKVSKKRD SEQRRRKRIS DKLQVLDNLV  180
PHSHKMMLGW QRQSQLQQAS YATQTFVPMM MTDMQFGAVN SSGITRAQPI YQMPISPTLY  240
QQQPPNFYHP STTASFEQPT FCPPTTRQLP PHF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010670991.10.0PREDICTED: transcription factor HFR1-like isoform X2
TrEMBLA0A0J8CSK20.0A0A0J8CSK2_BETVU; Uncharacterized protein